Browse of TCMCG044C74241 protein

CDS

Accession Number	TCMCG044C74241
gbkey	CDS
Protein Id	XP_026435034.1
Location	join(16011540..16011551,16011658..16011774,16011861..16011919,16012113..16012172,16012294..16012347,16012435..16012483,16012612..16012659,16012837..16012902,16013029..16013079,16013159..16013275,16013363..16013447,16013965..16014046,16014179..16014293,16014379..16014435,16014535..16014581,16014656..16014704,16015093..16015266)
Gene	LOC113332741
GeneID	113332741
Organism	Papaver somniferum

Protein

Length	413aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA492326
db_source	XM_026579249.1
Definition	flap endonuclease 1-like isoform X1 [Papaver somniferum]

EGGNOG-MAPPER Annotation

COG_category	L
Description	Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double- stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03032        [VIEW IN KEGG] ko03400        [VIEW IN KEGG] ko04147        [VIEW IN KEGG]
KEGG_ko	ko:K04799        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03030        [VIEW IN KEGG] ko03410        [VIEW IN KEGG] ko03450        [VIEW IN KEGG] map03030        [VIEW IN KEGG] map03410        [VIEW IN KEGG] map03450        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGCATAAAGGGTTTAACAAAGCTGTTAGCTAATAATGCACCCAAGAGTATGAAACAGGAAAAACTGGAGAGTTATACTGGTCGTGAGATTGCTATTGATGCTAGTTTGAGCATTTACCAGTTCCTTATTGTAGTAGGAAGAAATGGGACGGGAACACTTACGAATGAAGCGGGTGAAGTAACGAGCCATTTACACGGATTGTTTTCTCGAACGATTAGGCTTCTGGAAGCTGGACTGAAGCCGGTGTATGTTTTTGATGGTAAACCACCAGATTTAAAGAGGCAGGAGTTGGCAAAACGGTCATTAAAGAGGTCGGATGCTACTGAGGATTTGGCCGCAGCAACAGAGAGTGGGGATAAGGAAGACATTGAGAAGTTCAGTAAACGAACCGTGAAGGTGACCAAGCAACACAATGACGACTGCAAAGTGCTTCTACAACTTATGGGTTTACCCGTAGTTCAGGCTGCATCTGAAGCTGAGGCAGAGTGTGCTGCACTGTGCAAAAGTGGTAAGGTGTATGCTGTGTCATCTGAAGACATGGATACCTTAACTTTTGGTGCTCCAAGATTTCTGCGCCATCTAATGGGTCCAACCACCAAAGTCCCAGTTGTGGAATATGACATTGAGAAGATATTGACAGAACTGAACCTCACAATGGACCAGTTTGTTGATTTGTGCATCCTTTGTGGCTGTGACTATTGTCCCAGTATACGAGGTGTTGGGGAGAAGACTGCCTTAAAGCTTATCCGTCAGCATGGTTCTATAGAAAGTATTTTGGAGAATATAAACAGACAGAGGTATCATATACCTGAAAACTGGATGTATCAAGAAGCTCGCCATCTTTTTAAAGAACCTTTACTCTCTTCTGGTGATCAGCAGTTTGATATTACGTGGACCGGACCGGATGAGGAGGGGCTCATAAATTTTCTGGTGGAGGAAAACGGGTTCAACCATTATCGAGTTACAAAAGCTATACAAAAGATCGAAGCGTCTTCTAAAAAATCATCCCAAATCCGATTGACTTCCTCCAAACAAGTGGTGAGCACGTCATTTCTTGAGCGAAAGGAAACTAAATGCGTTCTTGGAGCTTTTGACCTGCCTGTCAAGCCAAAAGTGTTCTCTCATGGAGTTTGTATGCACCCACTTTCGAATTCAATTAGTATCTCAAACCCACCAATTATGGATATGAGATCGACGAATTGGGGGCCATTCTCCAGAAGTTTCTGCCTCAGTACATAA

Protein:   MGIKGLTKLLANNAPKSMKQEKLESYTGREIAIDASLSIYQFLIVVGRNGTGTLTNEAGEVTSHLHGLFSRTIRLLEAGLKPVYVFDGKPPDLKRQELAKRSLKRSDATEDLAAATESGDKEDIEKFSKRTVKVTKQHNDDCKVLLQLMGLPVVQAASEAEAECAALCKSGKVYAVSSEDMDTLTFGAPRFLRHLMGPTTKVPVVEYDIEKILTELNLTMDQFVDLCILCGCDYCPSIRGVGEKTALKLIRQHGSIESILENINRQRYHIPENWMYQEARHLFKEPLLSSGDQQFDITWTGPDEEGLINFLVEENGFNHYRVTKAIQKIEASSKKSSQIRLTSSKQVVSTSFLERKETKCVLGAFDLPVKPKVFSHGVCMHPLSNSISISNPPIMDMRSTNWGPFSRSFCLST